LncBase Predicted v.2
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Please cite:
Maria D. Paraskevopoulou, Ioannis S. Vlachos, Dimitra Karagkouni, Georgios Georgakilas, Ilias Kanellos, Thanasis Vergoulis, Konstantinos Zagganas, Panayiotis Tsanakas, Evangelos Floros, Theodore Dalamagas, and Artemis G. Hatzigeorgiou "DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts" Nucl. Acids Res. (2016) gkv1270
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hsa-miR-494-3p


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Gene
miRNA
Score
DIANA Links
chr22-38_28785274-29006793.1
hsa-miR-494-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623644
Biotype: lincRNA
Gene id: ENSG00000279978
Gene Name: chr22-38_28785274-29006793.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
207648-207661
0.017
1
7mer
267219-267232
0.016
2
9mer
98989-99005
0.012
1
8mer
247625-247643
0.008
0
7mer
169298-169316
0.008
2
7mer
96237-96264
0.008
1
7mer
72361-72374
0.007
2
7mer
157846-157853
0.006
3
7mer
124886-124908
0.006
2
7mer
73763-73782
0.005
4
7mer
164048-164065
0.005
5
7mer
146636-146652
0.005
1
7mer
17187-17210
0.005
2
7mer
18594-18606
0.005
0
7mer
134307-134331
0.005
Not Conserved
7mer
203673-203695
0.005
0
7mer
197546-197564
0.004
0
8mer
57333-57351
0.004
1
7mer
152547-152565
0.004
1
7mer
54862-54875
0.004
1
6mer
150029-150044
0.004
9
7mer
151211-151219
0.004
1
7mer
83000-83018
0.004
2
7mer
42280-42301
0.004
1
9mer
175952-175966
0.004
2
7mer
151052-151074
0.004
1
7mer
104081-104091
0.004
0
7mer
57587-57604
0.004
0
7mer
196903-196908
0.003
1
7mer
249756-249761
0.003
0
7mer
173325-173339
0.003
2
7mer
40559-40581
0.003
2
7mer
191094-191111
0.003
3
7mer
5900-5917
0.003
0
7mer
147094-147110
0.003
0
7mer
186274-186289
0.003
0
6mer
74884-74904
0.003
8
7mer
52412-52429
0.003
0
7mer
48484-48500
0.003
0
6mer
20786-20796
0.003
6
6mer
186744-186759
0.003
6
7mer
203701-203717
0.003
3
7mer
206541-206564
0.003
1
6mer
139490-139504
0.003
8
6mer
43516-43533
0.003
1
7mer
163879-163894
0.003
1
6mer
19520-19524
0.003
1
6mer
163156-163175
0.003
5
7mer
261662-261679
0.002
Not Conserved
6mer
44385-44411
0.002
1
6mer
86458-86469
0.002
6
6mer
215984-216000
0.002
4
7mer
227326-227334
0.002
0
7mer
238811-238827
0.002
1
6mer
165037-165051
0.002
2
6mer
69986-69990
0.002
2
6mer
175906-175915
0.002
2
6mer
11350-11364
0.002
0
6mer
95320-95330
0.002
1
6mer
132864-132876
0.002
2
6mer
252512-252525
0.002
0
6mer
208667-208677
0.002
4
6mer
265575-265598
0.002
0
6mer
12871-12876
0.002
1
6mer
28280-28297
0.002
4
6mer
172335-172345
0.002
3
6mer
56337-56341
0.002
1
6mer
20382-20399
0.002
1
6mer
51310-51332
0.002
0
6mer
4877-4896
0.002
2
6mer
200383-200408
0.002
2
6mer
24591-24611
0.002
1
6mer
179928-179943
0.002
6
6mer
67099-67125
0.002
1
6mer
168099-168118
0.002
2
6mer
140269-140273
0.002
2
6mer
139160-139175
0.002
3
6mer
4019-4045
0.002
0
7mer
37377-37395
0.002
0
6mer
80315-80323
0.002
2
6mer
223175-223192
0.002
0
6mer
61198-61207
0.002
1
6mer
161972-161991
0.002
2
6mer
71055-71067
0.002
0
6mer
156363-156382
0.002
1
6mer
244896-244908
0.002
0
6mer
136545-136557
0.002
1
6mer
233361-233373
0.002
1
6mer
115249-115272
0.002
1
6mer
156912-156924
0.002
0
6mer
138078-138086
0.002
0
6mer
256495-256515
0.001
1
6mer
184669-184692
0.001
1
6mer
23001-23018
0.001
1
6mer
50321-50341
0.001
0
6mer
128829-128844
0.001
3
6mer
204504-204523
0.001
1
6mer
182300-182312
0.001
1
6mer
16546-16566
0.001
2
6mer
92374-92386
0.001
1
6mer
200814-200840
0.001
0
6mer
43947-43959
0.001
1
6mer
77569-77587
0.001
0
6mer
244698-244710
0.001
0
6mer
229464-229479
0.001
2
6mer
63464-63477
0.001
0
6mer
7266-7282
0.001
2
6mer
160637-160649
0.001
1
6mer
9444-9469
0.001
0
6mer
257042-257063
0.001
0
6mer
233158-233166
0.001
1
6mer
243610-243624
0.001
0
6mer
133679-133697
0.001
1
6mer
80654-80665
0.001
0
6mer
164594-164621
0.001
0
6mer
138396-138408
0.001
0
6mer
160799-160803
0.001
1
6mer
11883-11901
0.001
4
6mer
118963-118979
0.001
0
6mer
128402-128424
0.001
0
6mer
161436-161462
0.001
1
6mer
134838-134851
0.001
1
6mer
13522-13547
0.001
1
6mer
36067-36090
0.001
1
6mer
205906-205918
0.001
0
6mer
118196-118222
0.001
4
6mer
210352-210366
0.001
0
6mer
26122-26145
0.001
0
6mer
23395-23407
0.001
2
6mer
112749-112771
0.001
0
6mer
194477-194489
0.001
1
6mer
90782-90794
0.001
1
6mer
243226-243238
0.001
0
6mer
138740-138760
0.001
1
6mer
95506-95518
0.001
1
6mer
201684-201702
0.001
Not Conserved
6mer
216722-216744
0.001
Not Conserved
6mer
219147-219159
0.001
1
6mer
4232-4240
0.001
0
6mer
133852-133864
0.001
1
6mer
15514-15526
0.001
1
6mer
51872-51891
0.001
0
6mer
76197-76209
0.001
1
6mer
217378-217398
0.001
1
6mer
252975-252996
0.001
1
6mer
125582-125597
0.001
0
6mer
36870-36878
0.001
0
6mer
19263-19275
0.001
0
6mer
159270-159284
0.001
0
6mer
147333-147345
0.001
0
6mer
247177-247189
0.001
0
6mer
79725-79746
0.001
0
6mer
97233-97245
0.001
1
6mer
218439-218451
0.001
1
6mer
247502-247514
0.001
0
6mer
176215-176227
0.001
0
6mer
240950-240977
0.001
0
6mer
206413-206426
0.001
1
6mer
42315-42334
0.001
3
6mer
91472-91484
0.001
1
6mer
17829-17841
0.001
1
6mer
79895-79907
0.001
1
6mer
248452-248477
0.001
0
6mer
94966-94978
0.001
1
6mer
18963-18974
0.001
0
6mer
27425-27437
0.001
Not Conserved
6mer
243742-243763
0.001
0
6mer
248674-248697
0.001
0
6mer
127791-127803
0.001
0
6mer
20443-20467
0.001
2
6mer
152696-152705
0.001
Not Conserved
7mer
243757-243772
0.001
Not Conserved
6mer
233189-233207
0.001
0
XLOC_013861
hsa-miR-494-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr21
Transcript: TCONS_00028968
Biotype: transcript isomorph
Gene id: XLOC_013861
Gene Name: XLOC_013861
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Breast Normal/Primary
- Lung Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
521-543
0.172
0
XLOC_005501
hsa-miR-494-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr6
Transcript: TCONS_00012617
Biotype: transcript isomorph
Gene id: XLOC_005501
Gene Name: XLOC_005501
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Prostate Normal/Primary
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
93-120
0.146
1
6mer
525-549
0.010
1
XLOC_013064
hsa-miR-494-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr19
Transcript: TCONS_00027536
Biotype: transcript isomorph
Gene id: XLOC_013064
Gene Name: XLOC_013064
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
Fibroblasts Lung Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1700-1720
0.090
1
8mer
381-399
0.050
1
7mer
1466-1484
0.006
0
6mer
1511-1533
0.005
1
6mer
1183-1187
0.004
0
XLOC_011693
hsa-miR-494-3p
1.000
mTTBlnEmP

Gene Details
Chromosome: chr16
Transcript: TCONS_00024250
Biotype: transcript isomorph
Gene id: XLOC_011693
Gene Name: XLOC_011693
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adrenal Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Brain Normal/Primary
- Breast Normal/Primary
- Heart Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1804-1821
0.119
0
6mer
1727-1743
0.016
0
6mer
200-216
0.013
0
XLOC_012567
hsa-miR-494-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: chr17
Transcript: TCONS_00026154
Biotype: transcript isomorph
Gene id: XLOC_012567
Gene Name: XLOC_012567
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1429-1436
0.128
8
6mer
598-608
0.003
2
LINC00475
hsa-miR-494-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000444476
Biotype: lincRNA
Gene id: ENSG00000225511
Gene Name: LINC00475
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
206-229
0.123
0
LINC00475
hsa-miR-494-3p
0.999
mTTBlnEmP

Gene Details
Chromosome: 9
Transcript: ENST00000421234
Biotype: lincRNA
Gene id: ENSG00000225511
Gene Name: LINC00475
UCSC graphic:
Expression:
  Cell Line Tissue Category
SK-N-SH Brain Cancer/Malignant
Fibroblasts Lung Normal/Primary
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
- Lung Normal/Primary
MCF7 Mammary Gland Cancer/Malignant
- Ovary Normal/Primary
- Prostate Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
217-240
0.123
0
XLOC_008910
hsa-miR-494-3p
0.998
mTTBlnEmP

Gene Details
Chromosome: chr10
Transcript: TCONS_00019001
Biotype: transcript isomorph
Gene id: XLOC_008910
Gene Name: XLOC_008910
UCSC graphic: -
Expression:
  Cell Line Tissue Category
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
- Kidney Normal/Primary
HEK293 Kidney Embryonic/Fetal/Stem/Progenitor
- Testes Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
923-929
0.114
1
LBX1-AS1
hsa-miR-494-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000456391
Biotype: antisense
Gene id: ENSG00000227128
Gene Name: LBX1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
260-284
0.091
6
6mer
397-404
0.017
10
LBX1-AS1
hsa-miR-494-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 10
Transcript: ENST00000430651
Biotype: antisense
Gene id: ENSG00000227128
Gene Name: LBX1-AS1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
2403-2427
0.092
6
6mer
2540-2547
0.016
10
U91328.22
hsa-miR-494-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: 6
Transcript: ENST00000608919
Biotype: lincRNA
Gene id: ENSG00000272810
Gene Name: U91328.22
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
21-39
0.107
1
XLOC_007324
hsa-miR-494-3p
0.997
mTTBlnEmP

Gene Details
Chromosome: chr9
Transcript: TCONS_00015947
Biotype: transcript isomorph
Gene id: XLOC_007324
Gene Name: XLOC_007324
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Brain Normal/Primary
- Colon Normal/Primary
- Prostate Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
645-666
0.090
1
6mer
709-723
0.008
1
6mer
494-516
0.006
0
RP11-15H20.6
hsa-miR-494-3p
0.996
mTTBlnEmP

Gene Details
Chromosome: 19
Transcript: ENST00000601239
Biotype: retained_intron
Gene id: ENSG00000213971
Gene Name: RP11-15H20.6
UCSC graphic:
Expression:
  Cell Line Tissue Category
GM12878 Blood Cancer/Malignant
K562 Blood Cancer/Malignant
HUVEC Blood Vessel Normal/Primary
SK-N-SH Brain Cancer/Malignant
HeLa Cervix Cancer/Malignant
h1ESC Embryonic Stem Cells Embryonic/Fetal/Stem/Progenitor
HREpiC Kidney Normal/Primary
HepG2 Liver Cancer/Malignant
IMR90 Lung Embryonic/Fetal/Stem/Progenitor
A549 Lung Cancer/Malignant
MCF7 Mammary Gland Cancer/Malignant
LCLBACD3 - Normal/Primary
LCLBACD2 - Normal/Primary
LCLBACD1 - Normal/Primary
LCLBAC - Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
1985-2001
0.092
1
6mer
1411-1423
0.007
1
6mer
941-954
0.004
0
AC006548.28
hsa-miR-494-3p
0.996
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623130
Biotype: sense_overlapping
Gene id: ENSG00000280156
Gene Name: AC006548.28
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
70623-70629
0.010
0
8mer
72533-72548
0.007
0
7mer
65776-65789
0.006
0
8mer
33758-33776
0.006
1
7mer
31250-31260
0.006
1
6mer
481-500
0.004
0
7mer
38091-38113
0.004
0
7mer
18748-18773
0.004
1
7mer
53198-53219
0.003
Not Conserved
8mer
39403-39420
0.003
Not Conserved
6mer
37580-37593
0.003
6
7mer
40673-40691
0.002
1
6mer
41649-41665
0.002
2
7mer
30897-30917
0.002
1
6mer
32559-32575
0.002
1
6mer
33928-33942
0.002
0
6mer
59344-59357
0.002
1
6mer
30417-30426
0.002
1
6mer
1818-1839
0.002
1
6mer
71305-71319
0.002
0
6mer
3009-3021
0.002
1
6mer
7557-7580
0.002
1
6mer
11187-11200
0.002
3
6mer
82989-83000
0.002
1
6mer
22320-22345
0.002
1
6mer
38874-38892
0.002
5
6mer
56266-56275
0.002
0
6mer
35474-35494
0.001
1
6mer
4858-4871
0.001
1
6mer
67859-67876
0.001
Not Conserved
6mer
79534-79543
0.001
Not Conserved
6mer
13720-13742
0.001
0
6mer
66481-66490
0.001
Not Conserved
6mer
13967-13986
0.001
1
6mer
78998-79011
0.001
0
6mer
29884-29908
0.001
1
6mer
12332-12345
0.001
0
6mer
8932-8944
0.001
Not Conserved
6mer
72060-72072
0.001
Not Conserved
6mer
11406-11427
0.001
0
6mer
66367-66382
0.001
0
6mer
82956-82977
0.001
0
bP-21264C1.2
hsa-miR-494-3p
0.996
mTTBlnEmP

Gene Details
Chromosome: 21
Transcript: ENST00000622995
Biotype: lincRNA
Gene id: ENSG00000278932
Gene Name: bP-21264C1.2
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
185-208
0.086
0
6mer
205-228
0.014
0
XLOC_009944
hsa-miR-494-3p
0.995
mTTBlnEmP

Gene Details
Chromosome: chr12
Transcript: TCONS_00020645
Biotype: transcript isomorph
Gene id: XLOC_009944
Gene Name: XLOC_009944
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
K562 Blood Cancer/Malignant
hMSC-BM Bone Marrow Stem/Progenitor
- Brain Normal/Primary
SK-N-SH Brain Cancer/Malignant
- Breast Normal/Primary
- Colon Normal/Primary
- Liver Normal/Primary
- Ovary Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
3651-3677
0.054
1
9mer
3222-3242
0.029
1
7mer
3425-3443
0.014
1
RP4-761J14.8
hsa-miR-494-3p
0.995
mTTBlnEmP

Gene Details
Chromosome: 12
Transcript: ENST00000396799
Biotype: antisense
Gene id: ENSG00000219410
Gene Name: RP4-761J14.8
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
9mer
1431-1454
0.067
6
8mer
1450-1467
0.025
4
6mer
274-291
0.005
4
RP3-323A16.1
hsa-miR-494-3p
0.995
mTTBlnEmP

Gene Details
Chromosome: 22
Transcript: ENST00000623959
Biotype: antisense
Gene id: ENSG00000279184
Gene Name: RP3-323A16.1
UCSC graphic:
Expression: -


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
30281-30295
0.012
1
7mer
19743-19766
0.007
1
7mer
38394-38405
0.007
2
8mer
27253-27266
0.007
1
8mer
51680-51700
0.006
Not Conserved
7mer
22013-22019
0.006
1
7mer
19348-19368
0.005
1
6mer
383-404
0.004
1
7mer
1207-1225
0.004
0
7mer
22618-22630
0.003
1
6mer
13530-13538
0.002
2
7mer
50812-50832
0.002
0
6mer
53257-53275
0.002
0
6mer
20015-20036
0.002
2
7mer
11402-11417
0.002
1
7mer
11436-11451
0.002
Not Conserved
6mer
33450-33464
0.002
Not Conserved
6mer
4599-4610
0.002
1
6mer
21709-21721
0.002
1
6mer
3511-3529
0.002
0
6mer
46612-46625
0.002
0
6mer
30850-30864
0.001
0
6mer
29356-29369
0.001
1
6mer
41766-41779
0.001
0
6mer
3835-3847
0.001
1
6mer
15981-15994
0.001
2
6mer
51264-51286
0.001
0
6mer
2389-2406
0.001
1
6mer
14545-14553
0.001
0
6mer
1430-1448
0.001
Not Conserved
6mer
31032-31044
0.001
Not Conserved
6mer
1222-1239
0.001
1
6mer
14570-14577
0.001
0
6mer
27274-27297
0.001
0
XLOC_011185
hsa-miR-494-3p
0.995
mTTBlnEmP

Gene Details
Chromosome: chr15
Transcript: TCONS_00023184
Biotype: transcript isomorph
Gene id: XLOC_011185
Gene Name: XLOC_011185
UCSC graphic: -
Expression:
  Cell Line Tissue Category
- Adipose Normal/Primary
- Adrenal Normal/Primary
- Brain Normal/Primary
- Breast Normal/Primary
- Colon Normal/Primary
Fibroblasts Foreskin Normal/Primary
- Heart Normal/Primary
- Kidney Normal/Primary
- Liver Normal/Primary
Fibroblasts Lung Normal/Primary
- Lung Normal/Primary
- Lymph Node Normal/Primary
- Ovary Normal/Primary
- Placenta Normal/Primary
- Prostate Normal/Primary
- Skeletal Muscle Normal/Primary
- Testes Normal/Primary
- Thyroid Normal/Primary
- White Blood Cell Normal/Primary


miRNA Details
Name: hsa-miR-494-3p
Sequence: ugaaacauacacgggaaaccuc
MirBase ID: MIMAT0002816
Related Diseases:

Binding Category
Transcript Position
Binding Score
Conservation
8mer
526-539
0.039
1
8mer
3261-3277
0.029
1
6mer
4449-4467
0.008
0
6mer
4448-4452
0.007
0
6mer
1283-1299
0.007
6
6mer
2377-2390
0.004
5
6mer
2919-2943
0.003
2
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